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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953877.1_cds_XP_016492863.1_83032
CDS Infomation

[gene=LOC107812318] [db_xref=GeneID:107812318] [protein=cation/H(+) antiporter 20-like] [protein_id=XP_016492863.1] [location=join(6339..6518,7565..7926,10222..10879,12800..13367,13937..14186,15438..15783)] [gbkey=CDS]
Sequence

ATGGATTTTAACGTATCCTCCATTAAAACATCTTCAGATGGAATATGGCAAGGAGAAAAT
CCTTTGCACTATGCTTTCCCATTGTTAATCATTCAAACTACCTTAGTTGTCTTCCTCAGT
CGCAGCCTTACTTTCCTCCTCAAGCCCCTCCAGCAACCCAAAGTCGTCGCTGAAATCCTT
GCTGGGATTATGCTTGGACCATCAGCTTTTGGTAGGAGTGAAGTCTTCACGCGCTGGATT
TTTCCAACATGGAGCACTCCGATTCTTGAATCTGTAGCAAGCATAGGGCTCTTATTCTTC
TTGTTCCTCGTTGGCCTAGAATTGGACTTGAAAACCATACGTAAAAGTGGAAAGAAAGCT
GCTGGAATAGCTTTTGCAGGAATTTCTCTGCCCTTTGTTTTTGGCATTGGAGTTGCTTTT
CTTCTAAGAAAAGTAATCAAAGGGGTTGATAGAGTTGGATATGGAGAATTTTTCATATTT
ATCGGAGTTTCACTTTCAATCACGGCCTTACCTGTTCTTGCTAGAATCCTCGCAGAACTA
AGGTTACTTACTACACCAGTAGGTGAAGTAGCCATGGCTGCAGCTGCATTCAATGATGTT
GCAGCATGGATCTTACTTGCTCTTGCAGTTGCTCTAGCTGGAGGAGGAAAAGCACATCAT
AGTCCTTTAATTTCCCTTTGGGTTCTTTTATCTGGAATTGGATTTGTGGTTTTTATGTTC
ATTATCGTTAGGCCAATAATGAATTGGATGGCAAGAAAAGCTTCATGTGGTCACCATATT
GTGGAGGAAACTTACATATGTTTAACCCTAGCTGGAGTAATGTTGTTTGGTTTTATGACT
GATCTTATAGGTATACATGCAATATTTGGAGCATTTATTTTTGGATTAACAATTCCAAAA
AGTGGAGATTTTGGAGGAAGATTAATCTTGAGAATTGAAGATTTTGTGTCTGGATTATTA
TTGCCACTTTATTTTGCTTCAAGTGGAATAAAAACTGATATAACAAAAATTCATAGTCTT
GGATCTTGGGGACTTGTTGTGCTTGTTGTGTCCACAGCTTGTGTAGGGAAGGTTTTGGGA
ACATTTATTGTGGGCATGTCATATTCTATACCAGTGAGAGAAGCCTTAACACTTGGAATT
TTGATGAACACAAAAGGATTAGTGGAGCTCATAGTTCTCAATATTGGCAAAGAAAAAAAG
GTTTTGGACGATGAGACGTTTGCAATATTGGTGGTTATGGCACTCTTTACAACCTTCATT
ACAACTCCTGCAGTAATGGCTATTCACAAACCCTCAATACACCAACTTCAACTAGAAAAA
ACACCAAAAATCAAAGAAAACAATCTCAGAATTCTAGCATGTATTCGTGGCCCTAGAGAT
GCACGTTCACTCATAACCCTTATTGAATCACTTAGGTCTAACAAAAATACTAATTCTTCA
ATTACCAAACTCTACGTAATGCAGCTCGTTGAATTCAGCGATCGACTCTCGTCGATCGTG
ATGGTTCAACGTGCCCGAAAGAACGGTTTTCCGTTCATCGGTCGTGTACTCCGGCGAGAT
GACACTACCGATCAGGTGACCACGGCGTTCGAGGCGTATAGTCAATTAGGTCGGGTCAAG
GTCAGACCTACAATGGCTATCTCAGCTTTGCCAAATTTGCATGAGGATATTATTCATGTT
GCGGAGAAGAAACGAGCTGAAATTATTATTTTGCCATTTCATAAACATTGGCAAATGGAA
GGAGAAGAAGAAATGGAGATTCATGCAGGGCACGGATGGAGAACGGTGAATGAGAAGGTG
ATGAGACAAGCGCCGTGCTCAGTGGCAGTGCTGGTTGATCGTGGACTAGAAGTGAATGAG
ATCATGAATTCCATGAGAGTTTGCATTGTGTTTTTTGGTGGAGCTGATTGTCGAAAGGCT
ATTGAATTTGGTAGCAGAATGGTTGAACATCCAGCTGTTAGGGTTACATTAGTAAGATTC
ATTCAAAATTTTGGGAGTAATTTTGATGAAGTTGAAAGGACTTTGGACGATACTACAATT
GCAGATTTCAAGATAAGGTGGGATAAACAAACTGTATATGATGAGAAAGAAGCAAGTGAT
GAATTGGTGGAACAAGTATTGGCAATAGGGAAAAGTGGTGAATTTGAGCTGATAATAGTA
GGAAAAGGCATGTTCCCACAATACATAATGGCAAAACTATTTGAAAACCCATCAACTGAT
CAGCATTCAGAATTGGGGCCAATGGCTAATATATTGGCTTCCTCTGGTAAAGAGATAAAA
AGTTCTGTCCTAATGATTCAACAACAAGCTTTTGGCTGTGAAAATACTAAGGATGTCAAT
TCAAAAGTGGCTAGCCAGTGTTAA

Peptide Sequence

PEP ID

XP_016492863.1
PEP Infomation

PREDICTED: cation/H(+) antiporter 20-like [Nicotiana tabacum]
Sequence

MDFNVSSIKTSSDGIWQGENPLHYAFPLLIIQTTLVVFLSRSLTFLLKPLQQPKVVAEIL
AGIMLGPSAFGRSEVFTRWIFPTWSTPILESVASIGLLFFLFLVGLELDLKTIRKSGKKA
AGIAFAGISLPFVFGIGVAFLLRKVIKGVDRVGYGEFFIFIGVSLSITALPVLARILAEL
RLLTTPVGEVAMAAAAFNDVAAWILLALAVALAGGGKAHHSPLISLWVLLSGIGFVVFMF
IIVRPIMNWMARKASCGHHIVEETYICLTLAGVMLFGFMTDLIGIHAIFGAFIFGLTIPK
SGDFGGRLILRIEDFVSGLLLPLYFASSGIKTDITKIHSLGSWGLVVLVVSTACVGKVLG
TFIVGMSYSIPVREALTLGILMNTKGLVELIVLNIGKEKKVLDDETFAILVVMALFTTFI
TTPAVMAIHKPSIHQLQLEKTPKIKENNLRILACIRGPRDARSLITLIESLRSNKNTNSS
ITKLYVMQLVEFSDRLSSIVMVQRARKNGFPFIGRVLRRDDTTDQVTTAFEAYSQLGRVK
VRPTMAISALPNLHEDIIHVAEKKRAEIIILPFHKHWQMEGEEEMEIHAGHGWRTVNEKV
MRQAPCSVAVLVDRGLEVNEIMNSMRVCIVFFGGADCRKAIEFGSRMVEHPAVRVTLVRF
IQNFGSNFDEVERTLDDTTIADFKIRWDKQTVYDEKEASDELVEQVLAIGKSGEFELIIV
GKGMFPQYIMAKLFENPSTDQHSELGPMANILASSGKEIKSSVLMIQQQAFGCENTKDVN
SKVASQC

Transcript Sequence

Gene sequence data has not been registered.